TAILS N-terminomic and proteomic datasets of healthy human dental pulp

AbstractThe Data described here provide the in depth proteomic assessment of the human dental pulp proteome and N-terminome (Eckhard et al., 2015) [1]. A total of 9 human dental pulps were processed and analyzed by the positional proteomics technique TAILS (Terminal Amine Isotopic Labeling of Substrates) N-terminomics. 38 liquid chromatography tandem mass spectrometry (LC-MS/MS) datasets were collected and analyzed using four database search engines in combination with statistical downstream evaluation, to yield the by far largest proteomic and N-terminomic dataset of any dental tissue to date. The raw mass spectrometry data and the corresponding metadata have been deposited in ProteomeXchange with the PXD identifier <http://www.ebi.ac.uk/pride/archive/projects/PXD002264>; Supplementary Tables described in this article are available via Mendeley Data (10.17632/555j3kk4sw.1)

How Universal is the Big Five? Testing the Five-Factor Model of Personality Variation Among Forager-Farmers in the Bolivian Amazon

The five-factor model (FFM) of personality variation has been replicated across a range of human societies, suggesting the FFM is a human universal. However, most studies of the FFM have been restricted to literate, urban populations, which are uncharacteristic of the majority of human evolutionary history. We present the first test of the FFM in a largely illiterate, indigenous society. Tsimane forager–horticulturalist men and women of Bolivia (n = 632) completed a translation of the 44-item Big Five Inventory (Benet-Martínez & John, 1998), a widely used metric of the FFM. We failed to find robust support for the FFM, based on tests of (a) internal consistency of items expected to segregate into the Big Five factors, (b) response stability of the Big Five, (c) external validity of the Big Five with respect to observed behavior, (d) factor structure according to exploratory and confirmatory factor analysis, and (e) similarity with a U.S. target structure based on Procrustes rotation analysis. Replication of the FFM was not improved in a separate sample of Tsimane adults (n = 430), who evaluated their spouses on the Big Five Inventory. Removal of reverse-scored items that may have elicited response biases produced factors suggestive of Extraversion, Agreeableness, and Conscientiousness, but fit to the FFM remained poor. Response styles may covary with exposure to education, but we found no better fit to the FFM among Tsimane who speak Spanish or have attended school. We argue that Tsimane personality variation displays 2 principal factors that may reflect socioecological characteristics common to small-scale societies. We offer evolutionary perspectives on why the structure of personality variation may not be invariant across human societies

New Constraints on Macroscopic Dark Matter Using Radar Meteor Detectors

We show that dark-matter candidates with large masses and large nuclear interaction cross sections are detectable with terrestrial radar systems. We develop our results in close comparison to successful radar searches for tiny meteoroids, aggregates of ordinary matter. The path of a meteoroid (or suitable dark-matter particle) through the atmosphere produces ionization deposits that reflect incident radio waves. We calculate the equivalent radar echoing area or `radar cross section' for dark matter. By comparing the expected number of dark-matter-induced echoes with observations, we set new limits in the plane of dark-matter mass and cross section, complementary to pre-existing cosmological limits. Our results are valuable because (A) they open a new detection technique for which the reach can be greatly improved and (B) in case of a detection, the radar technique provides differential sensitivity to the mass and cross section, unlike cosmological probes.Comment: Main text 14 pages and 11 figures, Appendix 2 pages and 3 figure

Track Extrapolation and Distribution for the CDF-II Trigger System

The CDF-II experiment is a multipurpose detector designed to study a wide range of processes observed in the high energy proton-antiproton collisions produced by the Fermilab Tevatron. With event rates greater than 1MHz, the CDF-II trigger system is crucial for selecting interesting events for subsequent analysis. This document provides an overview of the Track Extrapolation System (XTRP), a component of the CDF-II trigger system. The XTRP is a fully digital system that is utilized in the track-based selection of high momentum lepton and heavy flavor signatures. The design of the XTRP system includes five different custom boards utilizing discrete and FPGA technology residing in a single VME crate. We describe the design, construction, commissioning and operation of this system.Comment: 34 pages, 9 figures, submitted to Nucl.Inst.Meth.

Systems of Access: A Multidisciplinary Strategy for Assessing the Social Dimensions of Sustainability

The concept of access to natural resources has been a specific concern of economists and ecologists and is a distinct component in recent models of social sustainability. Using a series of conceptual and empirical examples, this article extends the notion of access broadly to social institutions and sociocultural norms. We argue that access may be usefully construed as an analytic tool that has direct applicability to many sustainability issues as it allows for cross-disciplinary and public engagement. Here the concept of access, linked to Amartya Sen’s theory of capabilities, also makes visible the multi-scaled and interconnected social processes that influence the material world and from which certain individuals and communities are excluded. This article examines access as a set of culturally appropriate and equitable engagements that promote social sustainability with a series of four examples: access to actions necessary to reclaim a polluted river; access to restorative natural environments; access to information and research findings; and access to decision-making processes. Insights from these examples are integrated within the wider discourse on sustainability

Gait Speed and Mood, Cognition, and Quality of Life in Older Adults With Atrial Fibrillation

Background: Low gait speed has been linked with impaired mood, cognition, and quality of life (QOL) in older adults. We examined whether low gait speed was associated with impaired mood, cognition, and QOL among older adults with atrial fibrillation (AF). Methods and Results: Participants (n=1185) had a diagnosis of AF, aged \u3e /=65 years, CHA2DS2VASc \u3e /=2 and had no contraindications to anticoagulation. Participants completed a 15-foot walk test, and low gait speed was categorized using cutoffs from the Fried Frailty Index. Participants self-reported measures of depressive symptoms (Patient Health Questionnaire 9 \u3e /=10), anxiety symptoms (Generalized Anxiety Disorder 7 \u3e /=10), cognitive impairment (Montreal Cognitive Assessment \u3c /=23), and potentially impaired Atrial Fibrillation Effect Quality-of-Life Questionnaire \u3c 80. Participants were on average aged 75.3 (SD: 7.0) years, 48.0% were women, and 85.5% were non-Hispanic white; 85.6% were taking an oral anticoagulant, 26.1% had low gait speed, 8.4% had elevated depressive symptoms, 5.7% had elevated anxiety symptoms, 41.1% were cognitively impaired, and 41.6% had potentially impaired AF-related QOL. Participants with low gait speed were significantly more likely to have elevated depressive symptoms (adjusted odds ratio: 2.1, 95% CI: 1.3-3.4), elevated anxiety symptoms (adjusted odds ratio: 2.2, 95% CI: 1.2-3.9), and cognitive impairment (adjusted odds ratio: 1.5, 95% CI: 1.1-2.1). Impaired AF-related QOL did not differ by gait speed after adjustment for clinical characteristics (adjusted odds ratio: 1.1, 95% CI: 0.8-1.5). Conclusions: Twenty-six percent of older adults with AF had low gait speed, and low gait speed was associated with impaired mood and cognition. Further research is needed to determine whether declines in gait speed lead to impaired mood and cognition or whether these conditions develop concurrently

Direct Nano-Imaging of Light-Matter Interactions in Nanoscale Excitonic Emitters

Strong light-matter interactions in localized nano-emitters when placed near metallic mirrors have been widely reported via spectroscopic studies in the optical far-field. Here, we report a near-field nano-spectroscopic study of the localized nanoscale emitters on a flat Au substrate. We observe strong-coupling of the excitonic dipoles in quasi 2-dimensional CdSe/CdxZnS1-xS nanoplatelets with gap mode plasmons formed between the Au tip and substrate. We also observe directional propagation on the Au substrate of surface plasmon polaritons launched from the excitons of the nanoplatelets as wave-like fringe patterns in the near-field photoluminescence maps. These fringe patterns were confirmed via extensive electromagnetic wave simulations to be standing-waves formed between the tip and the emitter on the substrate plane. We further report that both light confinement and the in-plane emission can be engineered by tuning the surrounding dielectric environment of the nanoplatelets. Our results lead to renewed understanding of in-plane, near-field electromagnetic signal transduction from the localized nano-emitters with profound implications in nano and quantum photonics as well as resonant optoelectronics.Comment: manuscript + supporting informatio